GSEA - Gene Set Enrichment Analysis

The gsea command is used to convert the Gene Set Enrichment Analysis gene set database.

The input files for this command are available on the Gene Set Enrichment Analysis downloads page.

The command supports the following files:

• msigdb.v6.2.symbols.gmt

These files have been validated and tested. The command may work for other file types, but is not guaranteed to.

Getting Started

python -m termlink gsea file:///msigdb.v6.2.symbols.gmt